MLOC_66365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3160130.5442990.7791030.519154
LEAShoots from the seedlings (10 cm shoot stage)1.267140.3369210.7438760.621938
INF1Young developing inflorescences (5mm)00.121240.08612810.116502
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)13.87717.713946.246388.63789
NODDeveloping tillers at six leaf stage, 3rd internode1.976110.5126162.286432.27555
CAR5Developing grain, bracts removed (5 DPA)00.041854700.0494542
CAR15Developing grain, bracts removed (15 DPA)0.1904270.2955950.2265010.620161



CDS Structure of MLOC_66365






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66365.1CUST_14961_PI427708080AvailableAvailablecontig_51468 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g33390.1 +1 7e-34 127 105/160 (66%) 13106.m03448 protein avr9/Cf-9 rapidly elicited protein 194, putative, expressed
TAIR PP10None-----