MLOC_66364 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.581421.757011.634731.79856
LEAShoots from the seedlings (10 cm shoot stage)9.398152.182164.58224.55745
INF1Young developing inflorescences (5mm)14.895814.015114.768413.477
INF2Developing inflorescences (1-1.5 cm)13.970515.778718.157818.7231
ROORoots from the seedlings (10 cm shoot stage)0.9889552.736813.008753.1418
NODDeveloping tillers at six leaf stage, 3rd internode4.98195.336281.1589713.5109
CAR5Developing grain, bracts removed (5 DPA)17.99118.023918.586419.3998
CAR15Developing grain, bracts removed (15 DPA)2.394921.910751.314165.0745



CDS Structure of MLOC_66364






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66364.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363056NoneNoneNoneNone
MLOC_66364.1CUST_5323_PI427708080AvailableAvailablecontig_51457 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g29470.1 -1 0.0 567 293/365 (80%) 13110.m02522 protein dehydrogenase, putative, expressed
TAIR PP10 AT4G37990.1 -1 5e-145 429 222/347 (64%) | Symbols: ELI3-2, ELI3, ATCAD8, CAD-B2 | elicitor-activated gene 3-2 | chr4:17855964-17857388 FORWARD LENGTH=359