MLOC_66355 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.074124.294124.852364.24748
LEAShoots from the seedlings (10 cm shoot stage)8.886830.8506552.171173.00836
INF1Young developing inflorescences (5mm)9.121038.53755.721376.77379
INF2Developing inflorescences (1-1.5 cm)7.305357.048846.795027.70104
ROORoots from the seedlings (10 cm shoot stage)21.51919.984912.407310.6913
NODDeveloping tillers at six leaf stage, 3rd internode0.3867360.2168850.4180380.537851
CAR5Developing grain, bracts removed (5 DPA)3.823183.092332.554462.98384
CAR15Developing grain, bracts removed (15 DPA)0.6693450.3437570.5714361.27541



CDS Structure of MLOC_66355






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66355.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361241NoneNoneNoneNone
MLOC_66355.3CUST_5322_PI427708080AvailableAvailablecontig_51438 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42900.1 -1 1e-120 383 303/649 (47%) 13101.m04417 protein ABC-2 type transporter domain containing protein, expressed
TAIR PP10 AT2G13610.1 -1 8e-139 431 310/582 (53%) ABC-2 type transporter family protein | chr2:5673827-5675776 REVERSE LENGTH=649