MLOC_66332 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1277.21835.574837.407989.131
LEAShoots from the seedlings (10 cm shoot stage)461.291299.911466.462355.006
INF1Young developing inflorescences (5mm)1186.571147.321180.871022.52
INF2Developing inflorescences (1-1.5 cm)1086.16896.5771060.41108.19
ROORoots from the seedlings (10 cm shoot stage)1006.26793.752835.9781031.23
NODDeveloping tillers at six leaf stage, 3rd internode117.827141.07228.303484.223
CAR5Developing grain, bracts removed (5 DPA)575.302588.955574.956587.234
CAR15Developing grain, bracts removed (15 DPA)270.087262.246286.105635.291



CDS Structure of MLOC_66332






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66332.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360502NoneNoneNoneNone
MLOC_66332.1CUST_5318_PI427708080AvailableAvailablecontig_51391 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g07700.1 +2 3e-148 422 198/215 (92%) 13105.m00840 protein ribosomal protein, putative, expressed
TAIR PP10 AT1G26910.1 +2 2e-134 386 185/215 (86%) | Symbols: RPL10B | Ribosomal protein L16p/L10e family protein | chr1:9321709-9322813 FORWARD LENGTH=221