MLOC_66298 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.445964.72044.356484.94384
LEAShoots from the seedlings (10 cm shoot stage)5.343743.780225.135774.02005
INF1Young developing inflorescences (5mm)0.07688810.0456260.03185620.049634
INF2Developing inflorescences (1-1.5 cm)0.01463750.01383220.03406170.0311969
ROORoots from the seedlings (10 cm shoot stage)16.290716.45339.0841819.0237
NODDeveloping tillers at six leaf stage, 3rd internode45.537545.861541.345123.772
CAR5Developing grain, bracts removed (5 DPA)0.747380.9293510.6214620.881797
CAR15Developing grain, bracts removed (15 DPA)0.6230090.602480.4291511.5955



CDS Structure of MLOC_66298






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66298.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363849NoneNoneNoneNone
MLOC_66298.1CUST_5316_PI427708080AvailableAvailablecontig_51359 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50490.1 +1 0.0 769 438/486 (90%) 13102.m05730 protein endoglucanase, putative, expressed
TAIR PP10 AT2G32990.1 +1 0.0 589 324/484 (67%) | Symbols: AtGH9B8, GH9B8 | glycosyl hydrolase 9B8 | chr2:14003361-14005844 FORWARD LENGTH=525