- Predicted Gene MLOC_66290
MLOC_66290 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66290_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.8324 | 5.33092 | 6.4984 | 7.85078 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 54.2355 | 76.798 | 96.0975 | 77.4032 |
INF1 | Young developing inflorescences (5mm) | 4.42612 | 3.49921 | 3.77765 | 3.99322 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.51515 | 3.48073 | 3.56391 | 4.88573 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.21487 | 1.49449 | 1.79657 | 2.12076 |
NOD | Developing tillers at six leaf stage, 3rd internode | 14.0588 | 17.7326 | 33.8906 | 80.4905 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.2865 | 11.2646 | 11.0623 | 14.3586 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.702132 | 0.749054 | 0.62341 | 2.04602 |
CDS Structure of MLOC_66290
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66290.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g38820.1 |
+3 |
6e-103 |
310 |
176/227 (78%) |
13102.m04277 protein expressed protein |
TAIR PP10 |
AT1G67700.1 |
+3 |
3e-65 |
211 |
104/162 (64%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:25374295-25375716 FORWARD LENGTH=230 |