- Predicted Gene MLOC_66289
MLOC_66289 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66289_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66289_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 70.3354 | 77.8255 | 83.3792 | 67.1511 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 47.1926 | 37.2438 | 35.8589 | 30.2583 |
INF1 | Young developing inflorescences (5mm) | 88.2652 | 82.2759 | 83.9375 | 63.2588 |
INF2 | Developing inflorescences (1-1.5 cm) | 51.4321 | 53.0888 | 55.0773 | 51.0663 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.0729 | 56.6107 | 78.1835 | 55.98 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.7649 | 20.7691 | 15.6152 | 53.8093 |
CAR5 | Developing grain, bracts removed (5 DPA) | 56.7656 | 60.3744 | 60.5624 | 49.6727 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.0523 | 11.5154 | 12.7768 | 25.3297 |
CDS Structure of MLOC_66289
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66289.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g38810.1 |
+2 |
0.0 |
671 |
352/379 (93%) |
13102.m04276 protein 26S proteasome non-ATPase regulatory subunit 6, putative, expressed |
TAIR PP10 |
AT4G24820.2 |
+2 |
0.0 |
601 |
295/364 (81%) |
26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | chr4:12790471-12792599 REVERSE LENGTH=387 |