MLOC_66257 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.962127.857432.331125.6864
LEAShoots from the seedlings (10 cm shoot stage)32.749629.790437.634424.8013
INF1Young developing inflorescences (5mm)29.958433.332432.20421.509
INF2Developing inflorescences (1-1.5 cm)20.307726.670823.46121.8404
ROORoots from the seedlings (10 cm shoot stage)23.662624.853125.113925.306
NODDeveloping tillers at six leaf stage, 3rd internode20.195825.116728.058170.4796
CAR5Developing grain, bracts removed (5 DPA)29.793330.011434.577725.0734
CAR15Developing grain, bracts removed (15 DPA)12.523312.342810.225722.0585



CDS Structure of MLOC_66257






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66257.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356828NoneNoneNoneNone
MLOC_66257.1CUST_5311_PI427708080AvailableAvailablecontig_51302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g39650.1 +2 4e-105 318 178/219 (81%) 13111.m03917 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT2G01470.1 +2 4e-47 166 110/227 (48%) | Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein | chr2:212215-214435 REVERSE LENGTH=393