MLOC_66252 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.823122.411419.88222.1389
LEAShoots from the seedlings (10 cm shoot stage)16.06723.068224.941456.48248
INF1Young developing inflorescences (5mm)3.020421.343060.877321.55932
INF2Developing inflorescences (1-1.5 cm)0.8426961.233231.550031.44122
ROORoots from the seedlings (10 cm shoot stage)8.5499210.4289.4524611.7635
NODDeveloping tillers at six leaf stage, 3rd internode2.923563.904860.1253028.18111
CAR5Developing grain, bracts removed (5 DPA)5.475196.404875.193086.2912
CAR15Developing grain, bracts removed (15 DPA)0.1742840.02057440.07597480.243776



CDS Structure of MLOC_66252






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66252.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66252.1CUST_14946_PI427708080AvailableAvailablecontig_51292 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g55150.1 +2 9e-96 297 172/222 (77%) 13101.m05804 protein bZIP transcription factor domain containing protein, expressed
TAIR PP10 AT3G58120.1 +2 1e-56 196 125/241 (52%) | Symbols: ATBZIP61, BZIP61 | Basic-leucine zipper (bZIP) transcription factor family protein | chr3:21521289-21523078 REVERSE LENGTH=329