MLOC_66232 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.195942.064562.514052.18059
LEAShoots from the seedlings (10 cm shoot stage)2.302631.710432.917151.72722
INF1Young developing inflorescences (5mm)1.19571.72271.380731.33692
INF2Developing inflorescences (1-1.5 cm)4.277295.272034.922075.74425
ROORoots from the seedlings (10 cm shoot stage)11.860213.20929.4989712.7134
NODDeveloping tillers at six leaf stage, 3rd internode2.001053.5814110.709913.1682
CAR5Developing grain, bracts removed (5 DPA)0.9846851.299740.9566021.14089
CAR15Developing grain, bracts removed (15 DPA)0.6486750.2386080.518741.17075



CDS Structure of MLOC_66232






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66232.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367555NoneNoneNoneNone
MLOC_66232.2CUST_5307_PI427708080AvailableAvailablecontig_51275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g50340.1 +1 0.0 1272 775/1002 (77%) 13106.m05408 protein receptor protein kinase CLAVATA1 precursor, putative, expressed
TAIR PP10 AT1G75820.1 +1 0.0 858 509/950 (54%) | Symbols: CLV1, FAS3, FLO5, ATCLV1 | Leucine-rich receptor-like protein kinase family protein | chr1:28463631-28466652 REVERSE LENGTH=980