MLOC_66220 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.065434200.152442
LEAShoots from the seedlings (10 cm shoot stage)78.261817.540727.112935.6955
INF1Young developing inflorescences (5mm)0.7772191.431731.30541.14251
INF2Developing inflorescences (1-1.5 cm)2.346852.713882.547253.16877
ROORoots from the seedlings (10 cm shoot stage)1.805641.824573.281032.72139
NODDeveloping tillers at six leaf stage, 3rd internode38.508727.968510.63174.959
CAR5Developing grain, bracts removed (5 DPA)6.203225.581575.287476.45436
CAR15Developing grain, bracts removed (15 DPA)0.921480.5056920.4222431.71853



CDS Structure of MLOC_66220






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66220.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374939NoneNoneNoneNone
MLOC_66220.1CUST_402_PI427708083AvailableAvailablecontig_51259 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g43280.1 +1 1e-52 180 94/121 (78%) 13102.m04804 protein aldehyde dehydrogenase, putative, expressed
TAIR PP10 AT4G36250.1 +1 9e-27 107 48/111 (43%) | Symbols: ALDH3F1 | aldehyde dehydrogenase 3F1 | chr4:17151029-17153381 FORWARD LENGTH=484