MLOC_66218 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.101314.680615.449515.0714
LEAShoots from the seedlings (10 cm shoot stage)14.815113.58214.684612.3601
INF1Young developing inflorescences (5mm)18.055715.307115.459713.8374
INF2Developing inflorescences (1-1.5 cm)12.895814.761215.711516.061
ROORoots from the seedlings (10 cm shoot stage)8.2350114.065415.236316.7739
NODDeveloping tillers at six leaf stage, 3rd internode8.30648.7119912.357430.7344
CAR5Developing grain, bracts removed (5 DPA)13.880615.699814.388515.1354
CAR15Developing grain, bracts removed (15 DPA)4.423984.205333.902929.84258



CDS Structure of MLOC_66218






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66218.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375811NoneNoneNoneNone
MLOC_66218.1CUST_5304_PI427708080AvailableAvailablecontig_51253 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g39730.2 -2 3e-171 491 260/330 (79%) 13107.m09961 protein ZCW7, putative, expressed
TAIR PP10 AT1G59600.1 -2 2e-88 278 150/305 (49%) | Symbols: ZCW7 | ZCW7 | chr1:21889927-21891910 REVERSE LENGTH=324