MLOC_66209 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.6042.611153.491863.05085
LEAShoots from the seedlings (10 cm shoot stage)2.259672.107492.305751.6947
INF1Young developing inflorescences (5mm)4.10174.569464.705914.10774
INF2Developing inflorescences (1-1.5 cm)3.573183.977833.37114.43512
ROORoots from the seedlings (10 cm shoot stage)2.9772.581973.493272.8815
NODDeveloping tillers at six leaf stage, 3rd internode5.247265.894568.1603715.9907
CAR5Developing grain, bracts removed (5 DPA)2.829864.315434.447984.1917
CAR15Developing grain, bracts removed (15 DPA)0.5430510.5939361.074151.81642



CDS Structure of MLOC_66209






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66209.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362979NoneNoneNoneNone
MLOC_66209.2CUST_401_PI427708083AvailableAvailablecontig_51241 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58510.1 +3 2e-93 288 216/354 (61%) 13102.m06774 protein GHMP kinases ATP-binding protein, putative
TAIR PP10 AT2G17265.1 +3 7e-67 218 165/319 (52%) | Symbols: HSK, DMR1 | homoserine kinase | chr2:7508606-7509718 FORWARD LENGTH=370