- Predicted Gene MLOC_66199
MLOC_66199 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66199_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66199_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.644161 | 2.09194 | 1.43799 | 1.55022 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.88002 | 1.69523 | 1.84048 | 1.30687 |
INF1 | Young developing inflorescences (5mm) | 3.98437 | 4.40621 | 5.10416 | 3.91678 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.3664 | 5.57731 | 5.32362 | 6.9353 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.15854 | 2.47807 | 1.70114 | 2.18662 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.94432 | 3.66663 | 2.34275 | 6.72832 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.41879 | 2.79989 | 2.78511 | 2.96888 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.461166 | 0.490892 | 0.726672 | 1.4097 |
CDS Structure of MLOC_66199
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66199.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g04960.5 |
+1 |
2e-20 |
94 |
41/53 (77%) |
13103.m00520 protein cysteinyl-tRNA synthetase, putative, expressed |
TAIR PP10 |
AT2G31170.1 |
+1 |
5e-15 |
78 |
33/55 (60%) |
| Symbols: SYCO ARATH | Cysteinyl-tRNA synthetase, class Ia family protein | chr2:13282559-13285616 REVERSE LENGTH=563 |