MLOC_66195 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.575522.474218.625419.3262
LEAShoots from the seedlings (10 cm shoot stage)10.08042.862932.243634.57399
INF1Young developing inflorescences (5mm)6056.578244.390646.4636
INF2Developing inflorescences (1-1.5 cm)40.01556.011641.636852.988
ROORoots from the seedlings (10 cm shoot stage)3.7517810.648.4531711.7109
NODDeveloping tillers at six leaf stage, 3rd internode1.019761.314230.9461763.96788
CAR5Developing grain, bracts removed (5 DPA)20.860520.438220.376420.3466
CAR15Developing grain, bracts removed (15 DPA)1.647840.8985981.558273.16782



CDS Structure of MLOC_66195






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66195.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250322.1NoneNoneNoneNone
MLOC_66195.1CUST_5300_PI427708080AvailableAvailablecontig_51216 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g02670.3 -1 0.0 859 491/1019 (48%) 13105.m00238 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT2G36200.1 -1 0.0 1244 644/1007 (64%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:15180078-15185189 REVERSE LENGTH=1009