MLOC_66158 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.183982.20752.4812.82313
LEAShoots from the seedlings (10 cm shoot stage)4.527080.862782.018862.19032
INF1Young developing inflorescences (5mm)4.908843.899613.193023.97709
INF2Developing inflorescences (1-1.5 cm)5.250567.165977.700368.85312
ROORoots from the seedlings (10 cm shoot stage)1.447351.95692.502462.83363
NODDeveloping tillers at six leaf stage, 3rd internode1.966663.125282.9130310.2499
CAR5Developing grain, bracts removed (5 DPA)2.074322.503862.086642.7042
CAR15Developing grain, bracts removed (15 DPA)0.3222530.297340.2837580.851238



CDS Structure of MLOC_66158






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66158.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250762.1NoneNoneNoneNone
MLOC_66158.5CUST_5297_PI427708080AvailableAvailablecontig_51166 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g48600.9 +1 0.0 705 397/505 (79%) 13103.m05244 protein domain of unknown function DUF966 domain containing protein, expressed
TAIR PP10 AT2G28150.1 +1 4e-102 323 205/500 (41%) Domain of unknown function (DUF966) | chr2:12000015-12002227 FORWARD LENGTH=540