MLOC_66145 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.809815.807716.397419.2499
LEAShoots from the seedlings (10 cm shoot stage)43.29596.0989418.396918.6005
INF1Young developing inflorescences (5mm)3.552620.8194390.8697841.57356
INF2Developing inflorescences (1-1.5 cm)0.2729770.2226611.705510.782966
ROORoots from the seedlings (10 cm shoot stage)13.258813.016912.30915.708
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.8493781.245151.165461.27188
CAR15Developing grain, bracts removed (15 DPA)0.03261990.11382700.27199



CDS Structure of MLOC_66145






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66145.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248720.1NoneNoneNoneNone
MLOC_66145.1CUST_5295_PI427708080AvailableAvailablecontig_51148 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57690.1 +2 5e-46 159 85/123 (69%) 13101.m06122 protein early nodulin 20 precursor, putative, expressed
TAIR PP10 AT1G22480.1 +2 1e-25 102 48/91 (53%) Cupredoxin superfamily protein | chr1:7934232-7935054 REVERSE LENGTH=174