MLOC_66134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.662051.036640.5452460.761951
LEAShoots from the seedlings (10 cm shoot stage)0.4296721.607131.572940.927724
INF1Young developing inflorescences (5mm)0.7467211.08121.527790.897221
INF2Developing inflorescences (1-1.5 cm)1.253981.274596.275972.42859
ROORoots from the seedlings (10 cm shoot stage)2.601282.535633.109552.80465
NODDeveloping tillers at six leaf stage, 3rd internode0.7893331.416580.6981553.44815
CAR5Developing grain, bracts removed (5 DPA)0.5356350.6036560.29480.450885
CAR15Developing grain, bracts removed (15 DPA)0.354770.2903670.3838920.758506



CDS Structure of MLOC_66134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66134.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66134.2CUST_17796_PI427708080AvailableAvailablecontig_51140 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g25770.1 +1 2e-66 228 148/292 (51%) 13105.m02640 protein OsWRKY45 - Superfamily of TFs having WRKY and zinc finger domains, expressed
TAIR PP10 AT3G56400.1 +1 4e-22 99 70/182 (38%) | Symbols: WRKY70, ATWRKY70 | WRKY DNA-binding protein 70 | chr3:20909082-20910409 REVERSE LENGTH=294