- Predicted Gene MLOC_66128
MLOC_66128 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66128_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.15066 | 6.52378 | 5.99404 | 5.87257 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.80986 | 5.09899 | 5.03204 | 4.56316 |
INF1 | Young developing inflorescences (5mm) | 18.0727 | 16.468 | 18.8067 | 14.2501 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.9652 | 16.0201 | 17.5476 | 15.8952 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.67964 | 8.22602 | 7.72298 | 9.30527 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.34178 | 4.32218 | 8.13139 | 14.6749 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.32635 | 8.99428 | 9.90092 | 8.78064 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.2636 | 2.29208 | 2.14208 | 4.94805 |
CDS Structure of MLOC_66128
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66128.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g45920.1 |
-1 |
0.0 |
674 |
413/490 (84%) |
13102.m05151 protein expressed protein |
TAIR PP10 |
AT1G73240.1 |
-1 |
7e-86 |
291 |
168/391 (43%) |
CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:27542397-27544668 REVERSE LENGTH=519 |