MLOC_66121 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.965368.5912510.06528.35114
LEAShoots from the seedlings (10 cm shoot stage)4.909560.9830791.143821.96524
INF1Young developing inflorescences (5mm)12.816314.532913.404510.3809
INF2Developing inflorescences (1-1.5 cm)11.788512.561711.613911.7864
ROORoots from the seedlings (10 cm shoot stage)5.640186.62643.710616.27589
NODDeveloping tillers at six leaf stage, 3rd internode1.785261.551581.452164.02284
CAR5Developing grain, bracts removed (5 DPA)16.448518.681118.6715.3294
CAR15Developing grain, bracts removed (15 DPA)64.596466.999473.8662143.442



CDS Structure of MLOC_66121






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66121.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374408NoneNoneNoneNone
MLOC_66121.2CUST_5293_PI427708080AvailableAvailablecontig_51128 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g71220.1 -1 4e-111 349 198/251 (79%) 13101.m07755 protein zinc finger protein, putative, expressed
TAIR PP10 AT3G10810.1 -1 8e-59 208 120/248 (48%) zinc finger (C3HC4-type RING finger) family protein | chr3:3381848-3384227 REVERSE LENGTH=496