- Predicted Gene MLOC_66120
MLOC_66120 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66120_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66120_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 43.0888 | 50.4587 | 47.2381 | 49.515 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.5324 | 6.23509 | 8.83015 | 13.2379 |
INF1 | Young developing inflorescences (5mm) | 28.6244 | 24.18 | 21.9932 | 21.4319 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.9616 | 23.1554 | 20.4195 | 23.405 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.3537 | 22.8764 | 17.4707 | 25.4776 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.5003 | 10.8577 | 9.52458 | 34.3202 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.7318 | 18.4488 | 14.7678 | 16.2834 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.50205 | 2.21434 | 2.37103 | 5.76679 |
CDS Structure of MLOC_66120
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66120.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g30980.1 |
+3 |
0.0 |
704 |
397/466 (85%) |
13105.m03179 protein RNA recognition motif containing protein, putative, expressed |
TAIR PP10 |
AT4G03110.1 |
+3 |
1e-164 |
482 |
258/409 (63%) |
| Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-defense related 1 | chr4:1376612-1379275 REVERSE LENGTH=441 |