MLOC_66094 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains150.835100.947114.685103.591
LEAShoots from the seedlings (10 cm shoot stage)00.31567800.288376
INF1Young developing inflorescences (5mm)0.4685510.1510280.1054570.211577
INF2Developing inflorescences (1-1.5 cm)0.08783270.086284600.116024
ROORoots from the seedlings (10 cm shoot stage)925.851498.575502.038505.867
NODDeveloping tillers at six leaf stage, 3rd internode00.011108600.0612931
CAR5Developing grain, bracts removed (5 DPA)0.1114690.1600820.2656450.177955
CAR15Developing grain, bracts removed (15 DPA)0.1175290.13866700.395805



CDS Structure of MLOC_66094






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66094.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251090.1NoneNoneNoneNone
MLOC_66094.1CUST_5286_PI427708080AvailableAvailablecontig_51093 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44080.1 -3 6e-160 453 227/249 (91%) 13102.m04904 protein aquaporin protein, putative, expressed
TAIR PP10 AT5G47450.1 -3 6e-138 396 191/247 (77%) | Symbols: ATTIP2;3, TIP2;3, DELTA-TIP3 | tonoplast intrinsic protein 2;3 | chr5:19248509-19249466 REVERSE LENGTH=250