- Predicted Gene MLOC_66088
MLOC_66088 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_66088_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_66088_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.51511 | 3.17205 | 4.10333 | 2.82768 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2051 | 23.0066 | 17.0075 | 10.5192 |
INF1 | Young developing inflorescences (5mm) | 11.476 | 9.79181 | 12.055 | 6.79908 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.69343 | 11.1283 | 12.8273 | 8.017 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.94015 | 2.44591 | 1.08392 | 1.81459 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.902275 | 1.22043 | 7.96737 | 5.50236 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.4945 | 6.46671 | 6.57916 | 3.58242 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.46411 | 2.45892 | 2.6234 | 4.0694 |
CDS Structure of MLOC_66088
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66088.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g05520.1 |
-3 |
9e-116 |
365 |
178/210 (85%) |
13106.m00537 protein OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed |
TAIR PP10 |
AT5G56580.1 |
-3 |
3e-85 |
282 |
137/219 (63%) |
| Symbols: ATMKK6, ANQ1, MKK6 | MAP kinase kinase 6 | chr5:22904851-22906620 REVERSE LENGTH=356 |