MLOC_66076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains53.910635.495940.30942.4811
LEAShoots from the seedlings (10 cm shoot stage)25.472425.121737.541623.714
INF1Young developing inflorescences (5mm)39.12645.111342.792938.8814
INF2Developing inflorescences (1-1.5 cm)45.023344.376840.66350.5041
ROORoots from the seedlings (10 cm shoot stage)108.10966.89759.143479.6007
NODDeveloping tillers at six leaf stage, 3rd internode30.726946.676248.3328122.923
CAR5Developing grain, bracts removed (5 DPA)40.868343.85138.829943.0092
CAR15Developing grain, bracts removed (15 DPA)19.644119.573915.606747.98



CDS Structure of MLOC_66076






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66076.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363291NoneNoneNoneNone
MLOC_66076.1CUST_5280_PI427708080AvailableAvailablecontig_51074 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57450.1 -3 2e-114 345 214/271 (79%) 13101.m06095 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT1G11360.4 -3 1e-66 219 138/241 (57%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:3822171-3822899 REVERSE LENGTH=242