MLOC_66075 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.222066.844063.214615.39909
LEAShoots from the seedlings (10 cm shoot stage)2.780971.109670.8282211.3849
INF1Young developing inflorescences (5mm)7.965859.2992810.55879.07516
INF2Developing inflorescences (1-1.5 cm)10.92439.058797.2285711.6561
ROORoots from the seedlings (10 cm shoot stage)1.884961.222215.501222.34209
NODDeveloping tillers at six leaf stage, 3rd internode0.9069290.4647520.4297321.31634
CAR5Developing grain, bracts removed (5 DPA)3.571663.477812.575613.68821
CAR15Developing grain, bracts removed (15 DPA)3.340772.297572.298127.30623



CDS Structure of MLOC_66075






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66075.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66075.1CUST_14924_PI427708080AvailableAvailablecontig_51074 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g57440.1 -3 2e-37 134 61/67 (91%) 13101.m06094 protein DNA repair metallo-beta-lactamase, putative, expressed
TAIR PP10 AT1G27410.1 -3 1e-23 95 45/67 (67%) DNA repair metallo-beta-lactamase family protein | chr1:9517226-9518743 FORWARD LENGTH=422