- Predicted Gene MLOC_66074
MLOC_66074 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.0738 | 15.5457 | 13.5897 | 12.444 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 359.022 | 577.402 | 824.875 | 410.333 |
| INF1 | Young developing inflorescences (5mm) | 6.4455 | 6.50616 | 6.42756 | 5.49914 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.16697 | 6.93131 | 9.02531 | 7.80048 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.17399 | 4.17273 | 13.7044 | 5.06269 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 235.157 | 262.79 | 462.301 | 702.692 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 100.629 | 109.826 | 107.422 | 102.435 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.77916 | 10.8694 | 9.66748 | 23.6257 |
CDS Structure of MLOC_66074
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_66074.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g56670.2 |
-1 |
2e-111 |
330 |
190/223 (85%) |
13103.m06184 protein photosystem I reaction center subunit III, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G31330.1 |
-1 |
1e-89 |
273 |
127/153 (83%) |
| Symbols: PSAF | photosystem I subunit F | chr1:11215011-11215939 REVERSE LENGTH=221 |
