MLOC_66071 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2328010.25120200.290099
LEAShoots from the seedlings (10 cm shoot stage)1.313491.336251.382271.12669
INF1Young developing inflorescences (5mm)1.07131.332241.390310.986284
INF2Developing inflorescences (1-1.5 cm)0.08267880.07648890.310330.141115
ROORoots from the seedlings (10 cm shoot stage)3.044141.596821.41322.21898
NODDeveloping tillers at six leaf stage, 3rd internode0.335210.3209820.211451.03692
CAR5Developing grain, bracts removed (5 DPA)0.3681390.1787620.2498760.241914
CAR15Developing grain, bracts removed (15 DPA)0.4862020.3631250.2795210.875372



CDS Structure of MLOC_66071






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66071.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_66071.3CUST_14923_PI427708080AvailableAvailablecontig_51073 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56660.2 +3 2e-142 436 298/630 (47%) 13103.m13024 protein calmodulin binding protein, putative, expressed
TAIR PP10 AT4G25800.2 +3 2e-15 80 62/237 (26%) Calmodulin-binding protein | chr4:13125224-13127765 FORWARD LENGTH=601