MLOC_66066 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.702179.007888.207019.62129
LEAShoots from the seedlings (10 cm shoot stage)9.969944.21845.383515.85096
INF1Young developing inflorescences (5mm)14.987718.22118.342315.5039
INF2Developing inflorescences (1-1.5 cm)16.689418.576816.539720.5896
ROORoots from the seedlings (10 cm shoot stage)2.502823.942053.316584.78327
NODDeveloping tillers at six leaf stage, 3rd internode4.095595.705547.5212521.6003
CAR5Developing grain, bracts removed (5 DPA)14.306515.209915.232515.6856
CAR15Developing grain, bracts removed (15 DPA)1.280411.170891.205843.04499



CDS Structure of MLOC_66066






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66066.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357219NoneNoneNoneNone
MLOC_66066.1CUST_18330_PI427708080AvailableAvailablecontig_51069 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g35170.1 +3 8e-155 446 240/277 (87%) 13101.m03558 protein tRNA methyltransferase, putative, expressed
TAIR PP10 AT5G17660.1 +3 3e-99 304 159/242 (66%) tRNA (guanine-N-7) methyltransferase | chr5:5818778-5820811 REVERSE LENGTH=312