MLOC_66056 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.504862.559681.683232.11088
LEAShoots from the seedlings (10 cm shoot stage)0.28007200.04595140.155295
INF1Young developing inflorescences (5mm)000.03024680.0239774
INF2Developing inflorescences (1-1.5 cm)0.02380340.022454500.0329362
ROORoots from the seedlings (10 cm shoot stage)1.106771.944510.5788882.00502
NODDeveloping tillers at six leaf stage, 3rd internode0.1237950.02954080.01567660.0878433
CAR5Developing grain, bracts removed (5 DPA)40.748740.889143.377241.8496
CAR15Developing grain, bracts removed (15 DPA)2.291733.353583.181587.03014



CDS Structure of MLOC_66056






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66056.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373532NoneNoneNoneNone
MLOC_66056.2CUST_18329_PI427708080AvailableAvailablecontig_50783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01570.1 -2 3e-125 378 240/374 (64%) 13105.m00097 protein auxin-induced protein 5NG4, putative, expressed
TAIR PP10 AT5G64700.1 -2 5e-82 264 160/334 (48%) nodulin MtN21 /EamA-like transporter family protein | chr5:25865190-25866845 REVERSE LENGTH=359