MLOC_66032 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.655058.107567.834329.12142
LEAShoots from the seedlings (10 cm shoot stage)6.772936.91167.585056.61386
INF1Young developing inflorescences (5mm)10.750314.269413.392211.5229
INF2Developing inflorescences (1-1.5 cm)14.897114.596114.694117.0768
ROORoots from the seedlings (10 cm shoot stage)10.582911.34888.9756114.7716
NODDeveloping tillers at six leaf stage, 3rd internode14.298720.997327.040883.8527
CAR5Developing grain, bracts removed (5 DPA)12.990315.634714.463315.2062
CAR15Developing grain, bracts removed (15 DPA)12.394412.835913.585331.6026



CDS Structure of MLOC_66032






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66032.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366542NoneNoneNoneNone
MLOC_66032.4CUST_5276_PI427708080AvailableAvailablecontig_51024 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04980.1 -2 3e-103 310 193/253 (76%) 13103.m00522 protein PHD-finger domain containing protein, putative, expressed
TAIR PP10 AT3G24010.1 -2 3e-35 131 54/68 (79%) | Symbols: ING1, ATING1 | RING/FYVE/PHD zinc finger superfamily protein | chr3:8676120-8678186 REVERSE LENGTH=234