MLOC_66031 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains60.518465.871965.417469.1537
LEAShoots from the seedlings (10 cm shoot stage)28.000710.975112.830316.1482
INF1Young developing inflorescences (5mm)74.566768.733652.186258.8119
INF2Developing inflorescences (1-1.5 cm)43.06849.96645.779753.5845
ROORoots from the seedlings (10 cm shoot stage)32.186544.578737.19957.8314
NODDeveloping tillers at six leaf stage, 3rd internode4.899095.764336.6922323.1946
CAR5Developing grain, bracts removed (5 DPA)62.649157.366556.641460.5407
CAR15Developing grain, bracts removed (15 DPA)14.776311.722610.629930.2432



CDS Structure of MLOC_66031






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_66031.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250490.1NoneNoneNoneNone
MLOC_66031.1CUST_5275_PI427708080AvailableAvailablecontig_51024 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32550.1 +1 0.0 986 508/550 (92%) 13110.m02843 protein T-complex protein, putative, expressed
TAIR PP10 AT3G23990.1 +1 0.0 928 473/548 (86%) | Symbols: HSP60, HSP60-3B | heat shock protein 60 | chr3:8669013-8672278 FORWARD LENGTH=577