MLOC_65969 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains70.050257.237358.149859.4744
LEAShoots from the seedlings (10 cm shoot stage)000.04462530.0364712
INF1Young developing inflorescences (5mm)0.03672120.021666700.0274662
INF2Developing inflorescences (1-1.5 cm)0.0192001000.0241572
ROORoots from the seedlings (10 cm shoot stage)16.43796.2379823.479910.4913
NODDeveloping tillers at six leaf stage, 3rd internode00.008377950.02535020.05453
CAR5Developing grain, bracts removed (5 DPA)0.023445400.02222680.0433068
CAR15Developing grain, bracts removed (15 DPA)0.6334820.09582270.5336421.01616



CDS Structure of MLOC_65969






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65969.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376479NoneNoneNoneNone
MLOC_65969.1CUST_5261_PI427708080AvailableAvailablecontig_50954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01980.1 +2 1e-179 523 289/463 (62%) 13108.m00131 protein transferase family protein, putative, expressed
TAIR PP10 AT5G67150.1 +2 4e-73 246 165/457 (36%) HXXXD-type acyl-transferase family protein | chr5:26795880-26797226 REVERSE LENGTH=448