MLOC_65967 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.320420.3284310.2256950.322842
LEAShoots from the seedlings (10 cm shoot stage)0.8306210.3236780.1626030.35973
INF1Young developing inflorescences (5mm)0.02096040.02526990.02629230.024178
INF2Developing inflorescences (1-1.5 cm)000.05386060.089574
ROORoots from the seedlings (10 cm shoot stage)0.522830.4757160.2911070.550421
NODDeveloping tillers at six leaf stage, 3rd internode0.4005130.4902620.6389761.54489
CAR5Developing grain, bracts removed (5 DPA)2.240862.498691.812912.52832
CAR15Developing grain, bracts removed (15 DPA)0.03616620.06463520.1293730.226431



CDS Structure of MLOC_65967






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65967.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65967.1NoneAvailableAvailablecontig_50954 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g01980.1 +3 9e-144 425 248/379 (65%) 13108.m00131 protein transferase family protein, putative, expressed
TAIR PP10 AT5G67150.1 +3 6e-56 195 136/379 (36%) HXXXD-type acyl-transferase family protein | chr5:26795880-26797226 REVERSE LENGTH=448