- Predicted Gene MLOC_65966
MLOC_65966 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65966_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65966_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0277385 | 0 | 0.0305113 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.163872 | 0.241989 | 0.498287 | 0.335598 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0610452 | 0 | 0 | 0.0297961 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0215534 | 0.00439316 | 0 | 0.023379 |
CAR5 | Developing grain, bracts removed (5 DPA) | 82.8281 | 83.3389 | 84.5433 | 90.8403 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.4409 | 14.2878 | 13.6547 | 34.3194 |
CDS Structure of MLOC_65966
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65966.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g07430.2 |
-3 |
2e-120 |
359 |
201/247 (81%) |
13102.m12319 protein OsMADS29 - MADS-box family gene with MIKCc type-box, expressed |
TAIR PP10 |
AT5G23260.2 |
-3 |
5e-39 |
144 |
100/251 (40%) |
| Symbols: TT16, ABS, AGL32 | K-box region and MADS-box transcription factor family protein | chr5:7836442-7838340 FORWARD LENGTH=252 |