MLOC_65965 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7777860.8518570.8359280.760893
LEAShoots from the seedlings (10 cm shoot stage)0.5172630.399410.2483720.316713
INF1Young developing inflorescences (5mm)1.91812.438541.883221.6056
INF2Developing inflorescences (1-1.5 cm)2.032132.738371.835652.34816
ROORoots from the seedlings (10 cm shoot stage)0.3585850.372610.4373930.424742
NODDeveloping tillers at six leaf stage, 3rd internode0.04693950.07458500.294175
CAR5Developing grain, bracts removed (5 DPA)1.011491.390711.128221.08575
CAR15Developing grain, bracts removed (15 DPA)0.2109890.1391720.07679070.352823



CDS Structure of MLOC_65965






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65965.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65965.1CUST_8894_PI427708083AvailableAvailablecontig_50951 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g16000.1 +2 4e-80 270 175/557 (31%) 13102.m01792 protein E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
TAIR PP10 AT3G61600.2 +2 4e-64 225 162/563 (29%) | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561