MLOC_65957 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.443941.736192.075261.84974
LEAShoots from the seedlings (10 cm shoot stage)4.568122.485711.639222.40439
INF1Young developing inflorescences (5mm)3.164084.246394.209873.49188
INF2Developing inflorescences (1-1.5 cm)4.150765.556515.636895.633
ROORoots from the seedlings (10 cm shoot stage)3.510574.449523.081094.95874
NODDeveloping tillers at six leaf stage, 3rd internode2.577912.281384.726897.89199
CAR5Developing grain, bracts removed (5 DPA)1.991932.478142.655242.34548
CAR15Developing grain, bracts removed (15 DPA)1.197921.503841.183023.33207



CDS Structure of MLOC_65957






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65957.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65957.1CUST_14909_PI427708080AvailableAvailablecontig_50942 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g07890.1 +2 1e-99 343 189/263 (72%) 13111.m00824 protein transposon protein, putative, CACTA, En/Spm sub-class, expressed
TAIR PP10 AT4G38620.1 +2 7e-83 269 125/146 (86%) | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282