MLOC_65944 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.368439.981410.098910.4697
LEAShoots from the seedlings (10 cm shoot stage)15.552517.146824.972316.7502
INF1Young developing inflorescences (5mm)4.523384.657714.283874.28863
INF2Developing inflorescences (1-1.5 cm)2.822552.947452.854273.58838
ROORoots from the seedlings (10 cm shoot stage)13.108215.865317.677519.6733
NODDeveloping tillers at six leaf stage, 3rd internode7.690958.2856823.390835.6089
CAR5Developing grain, bracts removed (5 DPA)3.282473.700223.322033.87691
CAR15Developing grain, bracts removed (15 DPA)4.584225.399033.3255212.3312



CDS Structure of MLOC_65944






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65944.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356835NoneNoneNoneNone
MLOC_65944.1CUST_5252_PI427708080AvailableAvailablecontig_50918 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g14770.3 +3 0.0 1685 853/965 (88%) 13102.m01642 protein phosphoenolpyruvate carboxylase, putative, expressed
TAIR PP10 AT2G42600.1 +3 0.0 1555 792/960 (83%) | Symbols: ATPPC2, PPC2 | phosphoenolpyruvate carboxylase 2 | chr2:17734541-17738679 REVERSE LENGTH=963