- Predicted Gene MLOC_65935
MLOC_65935 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65935_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65935_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.931 | 20.5054 | 19.3451 | 18.0701 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 34.3425 | 35.9499 | 30.4575 | 29.4299 |
INF1 | Young developing inflorescences (5mm) | 31.9709 | 34.8249 | 40.262 | 28.4449 |
INF2 | Developing inflorescences (1-1.5 cm) | 61.9426 | 57.5822 | 61.4245 | 62.8491 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.80531 | 17.7141 | 17.0051 | 20.0122 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.2052 | 24.9626 | 27.7796 | 92.6282 |
CAR5 | Developing grain, bracts removed (5 DPA) | 41.485 | 39.1736 | 38.5772 | 36.5547 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.1959 | 10.6176 | 11.8971 | 24.8348 |
CDS Structure of MLOC_65935
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65935.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g41960.1 |
-1 |
0.0 |
647 |
319/473 (67%) |
13110.m03933 protein eukaryotic translation initiation factor 3 subunit B, putative, expressed |
TAIR PP10 |
AT5G27640.1 |
-1 |
0.0 |
572 |
299/565 (53%) |
| Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3B1 | translation initiation factor 3B1 | chr5:9781207-9784759 REVERSE LENGTH=712 |