MLOC_65910 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.406313.81563.70524.1167
LEAShoots from the seedlings (10 cm shoot stage)12.028425.848623.58418.5064
INF1Young developing inflorescences (5mm)1.987942.945233.483962.86821
INF2Developing inflorescences (1-1.5 cm)1.871342.476262.122712.88582
ROORoots from the seedlings (10 cm shoot stage)14.22669.2526210.795412.7695
NODDeveloping tillers at six leaf stage, 3rd internode12.19314.264726.471650.3856
CAR5Developing grain, bracts removed (5 DPA)2.075632.511632.08532.7052
CAR15Developing grain, bracts removed (15 DPA)0.5896190.8478310.4279451.90154



CDS Structure of MLOC_65910






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65910.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361927NoneNoneNoneNone
MLOC_65910.1CUST_5244_PI427708080AvailableAvailablecontig_50861 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g10780.1 -2 4e-56 192 156/268 (58%) 13107.m01104 protein remorin, putative, expressed
TAIR PP10 AT2G41870.1 -2 2e-27 112 98/210 (47%) Remorin family protein | chr2:17471119-17472519 REVERSE LENGTH=274