MLOC_65893 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.784216.13916.190318.8098
LEAShoots from the seedlings (10 cm shoot stage)7.11132.646461.926763.02526
INF1Young developing inflorescences (5mm)22.616626.088526.196323.2459
INF2Developing inflorescences (1-1.5 cm)26.187128.51622.613930.8918
ROORoots from the seedlings (10 cm shoot stage)15.862912.554813.060613.6028
NODDeveloping tillers at six leaf stage, 3rd internode1.788552.616680.8676665.28538
CAR5Developing grain, bracts removed (5 DPA)21.512424.443323.219624.3476
CAR15Developing grain, bracts removed (15 DPA)5.887945.073456.253114.7374



CDS Structure of MLOC_65893






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65893.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65893.1CUST_14898_PI427708080AvailableAvailablecontig_50844 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g42230.1 +2 4e-105 317 210/268 (78%) 13105.m04490 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT1G11360.4 +2 4e-65 212 122/188 (65%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:3822171-3822899 REVERSE LENGTH=242