MLOC_65876 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.054271.316441.075431.12214
LEAShoots from the seedlings (10 cm shoot stage)7.4914811.369117.36839.03655
INF1Young developing inflorescences (5mm)4.52494.870534.721714.13247
INF2Developing inflorescences (1-1.5 cm)2.556233.006432.398662.97049
ROORoots from the seedlings (10 cm shoot stage)0.2778760.5941870.4616570.547754
NODDeveloping tillers at six leaf stage, 3rd internode8.6798315.329427.668445.5559
CAR5Developing grain, bracts removed (5 DPA)2.181452.680982.503132.33896
CAR15Developing grain, bracts removed (15 DPA)0.7570310.7691591.129522.16726



CDS Structure of MLOC_65876






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65876.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353575NoneNoneNoneNone
MLOC_65876.1CUST_5238_PI427708080AvailableAvailablecontig_50813 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g13740.1 +2 4e-78 263 215/322 (67%) 13101.m01513 protein myb-like DNA-binding domain containing protein, expressed
TAIR PP10 AT2G20570.1 +2 4e-49 179 139/299 (46%) | Symbols: GPRI1, GLK1, ATGLK1 | GBFs pro-rich region-interacting factor 1 | chr2:8855486-8857522 FORWARD LENGTH=420