- Predicted Gene MLOC_65876
MLOC_65876 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.05427 | 1.31644 | 1.07543 | 1.12214 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.49148 | 11.3691 | 17.3683 | 9.03655 |
INF1 | Young developing inflorescences (5mm) | 4.5249 | 4.87053 | 4.72171 | 4.13247 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.55623 | 3.00643 | 2.39866 | 2.97049 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.277876 | 0.594187 | 0.461657 | 0.547754 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.67983 | 15.3294 | 27.6684 | 45.5559 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.18145 | 2.68098 | 2.50313 | 2.33896 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.757031 | 0.769159 | 1.12952 | 2.16726 |
CDS Structure of MLOC_65876
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65876.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g13740.1 |
+2 |
4e-78 |
263 |
215/322 (67%) |
13101.m01513 protein myb-like DNA-binding domain containing protein, expressed |
TAIR PP10 |
AT2G20570.1 |
+2 |
4e-49 |
179 |
139/299 (46%) |
| Symbols: GPRI1, GLK1, ATGLK1 | GBFs pro-rich region-interacting factor 1 | chr2:8855486-8857522 FORWARD LENGTH=420 |