- Predicted Gene MLOC_65861
MLOC_65861 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.86857 | 3.66745 | 3.76219 | 3.49268 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.06654 | 2.03064 | 1.34242 | 1.31698 |
INF1 | Young developing inflorescences (5mm) | 1.8072 | 1.81939 | 1.96832 | 1.63766 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.63318 | 1.90001 | 1.87599 | 2.02624 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.28848 | 2.45005 | 3.9841 | 2.6146 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.05003 | 7.65584 | 15.2155 | 20.7238 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.09469 | 2.70858 | 1.9292 | 2.21799 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.386354 | 0.144071 | 0.16765 | 0.609944 |
CDS Structure of MLOC_65861
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65861.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g01660.1 |
-2 |
5e-93 |
294 |
178/241 (74%) |
13104.m00079 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed |
TAIR PP10 |
AT2G45630.2 |
-2 |
4e-65 |
220 |
134/236 (57%) |
D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18797089 FORWARD LENGTH=338 |