MLOC_65861 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.868573.667453.762193.49268
LEAShoots from the seedlings (10 cm shoot stage)2.066542.030641.342421.31698
INF1Young developing inflorescences (5mm)1.80721.819391.968321.63766
INF2Developing inflorescences (1-1.5 cm)1.633181.900011.875992.02624
ROORoots from the seedlings (10 cm shoot stage)3.288482.450053.98412.6146
NODDeveloping tillers at six leaf stage, 3rd internode7.050037.6558415.215520.7238
CAR5Developing grain, bracts removed (5 DPA)2.094692.708581.92922.21799
CAR15Developing grain, bracts removed (15 DPA)0.3863540.1440710.167650.609944



CDS Structure of MLOC_65861






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65861.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65861.1CUST_17792_PI427708080AvailableAvailablecontig_50783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01660.1 -2 5e-93 294 178/241 (74%) 13104.m00079 protein erythronate-4-phosphate dehydrogenase domain containing protein, expressed
TAIR PP10 AT2G45630.2 -2 4e-65 220 134/236 (57%) D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr2:18796000-18797089 FORWARD LENGTH=338