MLOC_65856 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3532940.2983480.2995170.354751
LEAShoots from the seedlings (10 cm shoot stage)0.03879950.04578710.1398920.0684718
INF1Young developing inflorescences (5mm)0.03848340.022632600.030103
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.532750.7629711.136951.11735
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.0409530.1529870.297993



CDS Structure of MLOC_65856






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65856.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_65856.1CUST_14892_PI427708080AvailableAvailablecontig_50777 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g41759.1 +2 0.0 541 259/340 (76%) 13104.m04105 protein expressed protein
TAIR PP10 AT5G25460.1 +2 3e-139 411 194/338 (57%) Protein of unknown function, DUF642 | chr5:8863430-8865394 FORWARD LENGTH=369