- Predicted Gene MLOC_65829
MLOC_65829 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65829_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65829_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 11.4208 | 15.1072 | 13.9451 | 15.0327 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 32.9989 | 24.8444 | 29.848 | 24.2456 |
INF1 | Young developing inflorescences (5mm) | 39.603 | 33.3822 | 31.0922 | 31.8772 |
INF2 | Developing inflorescences (1-1.5 cm) | 41.5986 | 44.3803 | 46.8474 | 52.6767 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.17399 | 11.0599 | 12.456 | 12.7632 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.92098 | 4.16068 | 3.73985 | 11.0441 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.7045 | 38.6901 | 35.9407 | 41.1491 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.4394 | 3.54799 | 4.68647 | 11.7216 |
CDS Structure of MLOC_65829
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65829.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g53540.3 |
-1 |
0.0 |
1102 |
643/808 (80%) |
13104.m11959 protein homeobox and START domains containing protein, putative, expressed |
TAIR PP10 |
AT1G05230.4 |
-1 |
0.0 |
934 |
496/698 (71%) |
| Symbols: HDG2 | homeodomain GLABROUS 2 | chr1:1513388-1517024 REVERSE LENGTH=721 |