- Predicted Gene MLOC_65828
MLOC_65828 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_65828_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_65828_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.01014 | 8.77466 | 8.82099 | 7.83126 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.34988 | 8.38543 | 7.57755 | 6.34694 |
INF1 | Young developing inflorescences (5mm) | 10.0293 | 11.9734 | 13.0269 | 8.82824 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.7718 | 12.97 | 12.1378 | 12.8348 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.56147 | 11.5861 | 10.6471 | 11.7237 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.8874 | 13.4909 | 14.3673 | 41.4567 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.2521 | 13.0158 | 14.0597 | 11.8708 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.0985 | 3.8112 | 4.24517 | 8.4023 |
CDS Structure of MLOC_65828
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65828.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g53530.1 |
+3 |
0.0 |
925 |
522/572 (91%) |
13104.m05512 protein expressed protein |
TAIR PP10 |
AT3G15160.1 |
+3 |
0.0 |
625 |
341/538 (63%) |
unknown protein; Has 266 Blast hits to 264 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0; Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr3:5104582-5108279 FORWARD LENGTH=562 |