MLOC_65818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains299.261290.957253.501311.95
LEAShoots from the seedlings (10 cm shoot stage)154.22135.969129.632125.837
INF1Young developing inflorescences (5mm)396.662403.078388.257356.269
INF2Developing inflorescences (1-1.5 cm)222.287226.361238.112270.737
ROORoots from the seedlings (10 cm shoot stage)187.443220.715274.481287.817
NODDeveloping tillers at six leaf stage, 3rd internode40.259435.024549.4013131.242
CAR5Developing grain, bracts removed (5 DPA)147.405165.806169.092175.955
CAR15Developing grain, bracts removed (15 DPA)58.17263.607144.3624142.161



CDS Structure of MLOC_65818






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375171NoneNoneNoneNone
MLOC_65818.1CUST_5231_PI427708080AvailableAvailablecontig_50711 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18570.1 -3 9e-123 353 172/192 (90%) 13103.m02227 protein 40S ribosomal protein S7, putative, expressed
TAIR PP10 AT3G02560.2 -3 4e-100 294 141/190 (74%) Ribosomal protein S7e family protein | chr3:542341-543168 FORWARD LENGTH=191