MLOC_65804 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.07034560.425950.3830790.304204
LEAShoots from the seedlings (10 cm shoot stage)0.1488380.05486680.132830.0900813
INF1Young developing inflorescences (5mm)1.205191.119251.145610.870222
INF2Developing inflorescences (1-1.5 cm)1.871561.79081.543581.74157
ROORoots from the seedlings (10 cm shoot stage)0.08305010.2333690.08577660.191657
NODDeveloping tillers at six leaf stage, 3rd internode0.10320.08719680.03325770.231659
CAR5Developing grain, bracts removed (5 DPA)0.7620890.7922360.7406560.644868
CAR15Developing grain, bracts removed (15 DPA)0.2122990.1291430.1041360.338843



CDS Structure of MLOC_65804






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65804.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376398NoneNoneNoneNone
MLOC_65804.3CUST_5228_PI427708080AvailableAvailablecontig_50681 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g38670.1 -3 0.0 1113 621/1005 (62%) 13106.m04008 protein receptor-like protein kinase precursor, putative
TAIR PP10 AT3G47570.1 -3 6e-179 575 360/918 (39%) Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010