MLOC_65790 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.022113900.0442591
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000.0109184
NODDeveloping tillers at six leaf stage, 3rd internode00.0079396700.0891102
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_65790






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65790.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375994NoneNoneNoneNone
MLOC_65790.1CUST_7009_PI427708080AvailableAvailablecontig_50665 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g37460.1 +3 0.0 842 439/486 (90%) 13104.m03577 protein glutamate decarboxylase, putative, expressed
TAIR PP10 AT5G17330.1 +3 0.0 750 374/446 (84%) | Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502