MLOC_65780 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.382765.723526.751166.01373
LEAShoots from the seedlings (10 cm shoot stage)13.907722.980615.722913.8501
INF1Young developing inflorescences (5mm)4.564883.99945.304213.76636
INF2Developing inflorescences (1-1.5 cm)8.548965.289477.408557.25853
ROORoots from the seedlings (10 cm shoot stage)35.183425.3133.236930.163
NODDeveloping tillers at six leaf stage, 3rd internode19.37323.730918.98372.9451
CAR5Developing grain, bracts removed (5 DPA)6.00824.905386.035665.14845
CAR15Developing grain, bracts removed (15 DPA)15.620414.889614.49133.5275



CDS Structure of MLOC_65780






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_65780.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360371NoneNoneNoneNone
MLOC_65780.1CUST_5224_PI427708080AvailableAvailablecontig_50655 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g29540.3 +2 8e-85 266 167/317 (53%) 13103.m12878 protein ATP-dependent protease, putative, expressed
TAIR PP10 AT1G75460.1 +2 4e-49 171 111/282 (39%) ATP-dependent protease La (LON) domain protein | chr1:28327986-28328822 FORWARD LENGTH=278