- Predicted Gene MLOC_65780
MLOC_65780 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.38276 | 5.72352 | 6.75116 | 6.01373 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.9077 | 22.9806 | 15.7229 | 13.8501 |
| INF1 | Young developing inflorescences (5mm) | 4.56488 | 3.9994 | 5.30421 | 3.76636 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.54896 | 5.28947 | 7.40855 | 7.25853 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 35.1834 | 25.31 | 33.2369 | 30.163 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.373 | 23.7309 | 18.983 | 72.9451 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.0082 | 4.90538 | 6.03566 | 5.14845 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.6204 | 14.8896 | 14.491 | 33.5275 |
CDS Structure of MLOC_65780
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65780.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g29540.3 |
+2 |
8e-85 |
266 |
167/317 (53%) |
13103.m12878 protein ATP-dependent protease, putative, expressed |
| TAIR PP10 |
AT1G75460.1 |
+2 |
4e-49 |
171 |
111/282 (39%) |
ATP-dependent protease La (LON) domain protein | chr1:28327986-28328822 FORWARD LENGTH=278 |