- Predicted Gene MLOC_65750
MLOC_65750 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.6135 | 32.3072 | 25.8389 | 32.6324 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 53.471 | 37.4583 | 33.9123 | 40.237 |
| INF1 | Young developing inflorescences (5mm) | 49.3349 | 37.6211 | 32.5196 | 38.0058 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.4943 | 38.259 | 35.7589 | 47.4516 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.8368 | 21.804 | 17.1059 | 30.1286 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.74836 | 10.986 | 14.5878 | 42.9528 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 62.3404 | 53.2202 | 54.0363 | 63.5183 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 39.1231 | 34.6503 | 38.1023 | 97.9729 |
CDS Structure of MLOC_65750
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_65750.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05950.1 |
-1 |
0.0 |
1500 |
971/1314 (74%) |
13105.m00632 protein TOC159, putative, expressed |
| TAIR PP10 |
AT4G02510.1 |
-1 |
0.0 |
885 |
546/864 (63%) |
| Symbols: TOC159, TOC86, PPI2, TOC160, ATTOC159 | translocon at the outer envelope membrane of chloroplasts 159 | chr4:1104766-1109360 FORWARD LENGTH=1503 |
